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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.3G055300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 526aa MW: 54326.5 Da PI: 7.0241 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G055300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.9 | 2.8e-30 | 254 | 312 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed+ v+++tYeg+Hnh+
Sevir.3G055300.1.p 254 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDKAVLITTYEGTHNHQ 312
7***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MDLVPKQEQH KEEEDKEEAM ILAEHGDQAF GHAGGGRRRS EIKEVDFFST GGAHRRNDDD 60 GNGRDGRSRE AGALGRGNTT VNTALDLLTT AAAATPVNAG EGAAAGAASD HNKQMAVATV 120 EGELRQAGEE NRRLRRMLDD LTRSHSALYH QLIQAQQHQQ ASGSANSMLP ATMPAGVQFM 180 DPRMAPAIRA GAPASFDGDR GDSDGGSGSG GEADQNKQDG TAGTPERGEN AAAEAPLRRA 240 RVSVRARSEA PMISDGCQWR KYGQKMAKGN PCPRAYYRCT MATGCPVRKQ VQRCAEDKAV 300 LITTYEGTHN HQLPPAAAAM AKTTSAAAAM LLSGPAASRD ALFAGHHVAA TAPAPLFQSY 360 PYASAAMGAT LSASAPFPTI TLDLTHSPPA SAAGLHLQHR PPALPAMPFP MYGFPAAAHR 420 PAVPLLPQPP TAVSLGMMDG RNRAALETMT AAITSDPNFT TALAAALSTI MGGGAEAAPR 480 GGAGADAGDG NNGGSGTEPP ATAAAAGARE TALHALLQRL HDSRQ*
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