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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.3G050400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 146aa MW: 15989 Da PI: 10.2721 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G050400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 45.8 | 1.3e-14 | 26 | 85 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +r+ +NRe+ArrsR+RK++++eeL +v+ L+aeN + + ++ + e +k++ e+
Sevir.3G050400.1.p 26 ERKRKRMLSNRESARRSRARKQQRLEELVAEVARLQAENAQVQTRIATFDRELSKVDGEN 85
46789999************************************9999999988887765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MSSRRSPSPD SNTDSGSAGG GFAADERKRK RMLSNRESAR RSRARKQQRL EELVAEVARL 60 QAENAQVQTR IATFDRELSK VDGENAVLRA RHGELAGRLE SLGGVLEVLQ MAGAPVDIPE 120 IPDPLLRPWQ PPFPMQPIAA DAFQF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU976671 | 2e-85 | EU976671.1 Zea mays clone 986724 ocs element-binding factor 1 mRNA, complete cds. |