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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G003900.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 314aa MW: 34679.8 Da PI: 5.7834 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G003900.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 170.9 | 4e-53 | 9 | 146 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...........kvkaeekewyfFskrdkkyatgkrknratks 80
+ppGfrFhPt+eelv +yL++kv++++++ ++i+evd+y++ePwdL++ ++++ewyfFs +d+ky++g+r+nrat++
Sevir.3G003900.2.p 9 VPPGFRFHPTEEELVGYYLARKVARSSCDDLDIIQEVDLYRIEPWDLQErcklggaaghdDGGQTTSEWYFFSYKDRKYPSGTRTNRATAA 99
69*************************9999****************95577777665442222455************************ PP
NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g+Wkatg+dk+vls +++++g++ktLvfykgrap+g+ktdW+mheyrl
Sevir.3G003900.2.p 100 GFWKATGRDKPVLS-SSRVIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 146
**************.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MMVEQGELVP PGFRFHPTEE ELVGYYLARK VARSSCDDLD IIQEVDLYRI EPWDLQERCK 60 LGGAAGHDDG GQTTSEWYFF SYKDRKYPSG TRTNRATAAG FWKATGRDKP VLSSSRVIGM 120 RKTLVFYKGR APNGRKTDWI MHEYRLQPSN HQEEGWVVCR AFQKPIPNQR PFVFPTYATP 180 AGYCYDHLPS MDGSHQYLQV GGGPAPHALA AGNSFFPQQF YSDDDDLLES KKHDNLFSSI 240 LPPLESPTAA IAACAQQRAA AHVVASENDD ELMVQGGGGH AAAAAAGAID WNFLDTLLST 300 TTSQLLEPST LLQ*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK373002 | 9e-59 | AK373002.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3017O09. |