PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.2G450000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | EIL | ||||||||
Protein Properties | Length: 625aa MW: 67446.8 Da PI: 5.9101 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 458.6 | 4.6e-140 | 70 | 461 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 +el++r w+d+++l+rlke+++q+ + + + ++s+eqarrkkmsraQDgiLkYMlk+mevc aqGfvYgiipe+gkpv+gasd+L Sevir.2G450000.1.p 70 DELERRIWRDRVRLRRLKEQQLQQQRGGGRGKEVPRARQSQEQARRKKMSRAQDGILKYMLKMMEVCSAQGFVYGIIPENGKPVTGASDNL 160 79*********************988888778999999***************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS EIN3 92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182 raWWkekv+fdrngpaa++ yq + +g+ + +++ + +hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G e ww+ Sevir.2G450000.1.p 161 RAWWKEKVRFDRNGPAAVARYQ---GAGGGDGGAVAAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPQGAEPWWP 248 *********************5...46666666677899**************************************************** PP HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXX CS EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqs 271 e+g++++ g+ppykkphdlkkawkv+vLtavikhmsp+++++r+l+rqsk+lqdkm+a+e ++l+vl+qee+++ +++ ++ +++++ Sevir.2G450000.1.p 249 EAGVPRELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTAREIVTWLAVLKQEEDLYLMLHPGahPPPCSTNA 339 ****************************************************************************999886555555555 PP XXXXXX.XXXXXXXXXXXXXX.XXXXXXXXXX....................................XXXXXXXXXXXXX..XXXXXXXX CS EIN3 272 pkvtls.ceqkedvegkkeskikhvqavktta....................................gfpvvrkrkkkps..esakvssk 323 ++ +s ++ ++dv+g ++ + +++++ k ++++ +kr + p+ e++ + s+ Sevir.2G450000.1.p 340 AALPFSaSSGEYDVDGADDGE-ETARNTKPSPndapafvdlsssmdadattgnnrflmpaalmkeeaaDAELFQKRSAVPAavEPELMLSN 429 555554155699***666555.333333333356899***************************************987651155555554 PP .......XXXXXXX.XXXXXXXXXXXXXXXXX CS EIN3 324 .evsrtcqssqfrgsetelifadknsisqney 354 +tc ++q+++s+ ++f d+++++ ++y Sevir.2G450000.1.p 430 sFRAYTCGNAQCPHSSCVHGFLDRSARNTHQY 461 2678**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 7.5E-124 | 70 | 320 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.6E-69 | 198 | 328 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 9.94E-58 | 200 | 323 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 625 aa Download sequence Send to blast |
MMGGGPLLLD HRLPLPADDK GALFSGFGGD CFFGEGDLVN PPPPAHDEIM SFPGGDDSDD 60 GDDDVVGGID ELERRIWRDR VRLRRLKEQQ LQQQRGGGRG KEVPRARQSQ EQARRKKMSR 120 AQDGILKYML KMMEVCSAQG FVYGIIPENG KPVTGASDNL RAWWKEKVRF DRNGPAAVAR 180 YQGAGGGDGG AVAAAPAGPH SLHELQDTTL GSLLSALMQH CDPPQRRFPL EKGVPPPWWP 240 QGAEPWWPEA GVPRELGPPP YKKPHDLKKA WKVAVLTAVI KHMSPDVDKV RRLVRQSKCL 300 QDKMTAREIV TWLAVLKQEE DLYLMLHPGA HPPPCSTNAA ALPFSASSGE YDVDGADDGE 360 ETARNTKPSP NDAPAFVDLS SSMDADATTG NNRFLMPAAL MKEEAADAEL FQKRSAVPAA 420 VEPELMLSNS FRAYTCGNAQ CPHSSCVHGF LDRSARNTHQ YACKFNSPAV APSAATDNNK 480 LLAPSVFLPP GQAVGGFDFD VPVDGQRSLA ELMDMYEANV GTSRSLSNTD MVATGGVQVS 540 GQFLTPCLFG NLNQPQQQQQ QSAGFYVRDD ALPFGGDIAG ASPELRFSSG LDGVAVGTSS 600 HYGGALQLQQ PQPHKPAAGS NWFY* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-68 | 197 | 328 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-68 | 197 | 328 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.2G450000.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004958734.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q8W3L9 | 0.0 | EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2 | ||||
TrEMBL | K3ZRI3 | 0.0 | K3ZRI3_SETIT; Uncharacterized protein | ||||
STRING | Si029213m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-142 | ETHYLENE-INSENSITIVE3-like 1 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.2G450000.1.p |
Publications ? help Back to Top | |||
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