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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sevir.2G384500.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
bHLH |
| Protein Properties |
Length: 282aa MW: 30838.3 Da PI: 4.5786 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.2G384500.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 30 | 9.6e-10 | 205 | 245 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r+RR+riN+++ L+ l+P+ +K++ +++Le+A +Y+k Lq
Sevir.2G384500.1.p 205 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAAQYVKFLQ 245
9******************97.....8******************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009733 | Biological Process | response to auxin |
| GO:0016049 | Biological Process | cell growth |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048766 | Biological Process | root hair initiation |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
METDMMAQFL GADDHCFTYE HVDESMEALV SLFLPSLDTD SNSSSSCLNY DVSPQCWPQP 60
GHSSSVTSLL DPAQNFESFE FPVMDPLPPT DFNSPSDVPY LSEDLSPLHG NLSSSIEEEV 120
ANVAPATKKR KSSATIKASK KTKKVGKKDS VINEDGSNAY VDAQSSSSCT SEEGNLEGNA 180
NSSSKKMSTR ASRGAATDPQ SLYARKRRER INERLRILQN LVPNGTKVDI STMLEEAAQY 240
VKFLQIQIKL LSSDDMWMYA PIAYNGINIS NVDLNISALQ K*
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