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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sevir.2G270300.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
NAC |
| Protein Properties |
Length: 378aa MW: 40469.8 Da PI: 9.1194 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.2G270300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 179.9 | 6.4e-56 | 26 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL++k+++ ++++ ++i+evd++k+ePwdLp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke
Sevir.2G270300.1.p 26 LPPGFRFHPTDEELITYYLRQKIADGSFTA-RAIAEVDLNKCEPWDLPEKAKLGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKE 115
79*************************999.89***************99999************************************** PP
NAM 92 vlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ + elvg+kktLvfykgrap+gekt+Wvmheyrl
Sevir.2G270300.1.p 116 IYTGqlpaTPELVGMKKTLVFYKGRAPRGEKTNWVMHEYRL 156
**9766666667***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MDGSAAASAA AGDGGGGGGS KKEESLPPGF RFHPTDEELI TYYLRQKIAD GSFTARAIAE 60
VDLNKCEPWD LPEKAKLGEK EWYFFSLRDR KYPTGVRTNR ATNAGYWKTT GKDKEIYTGQ 120
LPATPELVGM KKTLVFYKGR APRGEKTNWV MHEYRLHSKS APKSNKDEWV VCRVFAKSAG 180
AKKYPSNNAH SRPHHHPYTL DMVPPLLPTL LQHDPFARGH HHHPYMTPAD LAELARFARG 240
TPGLHPHIQP HPGTAAAAYM NPAAAAAVAP PFTLSGGLSL NLGAPPAMPS PPPPPAALHA 300
MSMSMAMSQQ AAPSGAAGNH QVMAGDHQQQ MAPVGLGGCV IAPGGDGGFG ADATGARYQS 360
LDVEQLVERY WPAGYQV*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-56 | 25 | 183 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-56 | 25 | 183 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-56 | 25 | 183 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-56 | 25 | 183 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-56 | 25 | 183 | 19 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-56 | 25 | 183 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-56 | 25 | 183 | 16 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
