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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.2G264600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 498aa MW: 55185.1 Da PI: 7.215 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.2G264600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.8 | 3.6e-11 | 189 | 232 | 1 | 41 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41
e++ k rr+++NReAAr+sR+RKka+i++Le + ++Le+e
Sevir.2G264600.1.p 189 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 232
6777999************************9633355555555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 498 aa
Download sequence Send
to blast |
MASGGGSMRE QQQEMNISFG MMSHHGHHHH QPPSSSSSSS MHAAAASFMS GKEASGAYDH 60 LGELDQALFM YLDHGSSHGD ATHQEQRQTL NIFPSQPMHV EPSPKGEISL VLSPAPVGSK 120 QPRSPQDHHH HQQAAMEELA GSRRLQQEHH HLQHQPFAAA GAEPAAPGMI KDVKPLAKKD 180 HRRGASTAER DPKTLRRLAQ NREAARKSRL RKKAYIQQLE SSRIRLAQLE QELHTARAQG 240 VFFPNSGLLA DQGVAGKGVP IGGIDGLSSE AAMFDVEYGR WQEEHYRLMY ELRAALQQHL 300 PEGELQMYVE SCLAHHDEMV GIKEGAIKGD VFHLISGVWR SPAERCFLWL GGFRPSEVIK 360 MLLSHVEPLT EQQIVGVYGL QQSALETEEA LSQGLDALYQ SLSDTVVSDA LSCPSNVANY 420 MGQMAAAMNK LSTLEGFVRQ AENLRQQTLH RLHQILTTRQ MARSLLAVSD YFHRLRTLSS 480 LWVTRPRATQ EQQQGHS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU966928 | 0.0 | EU966928.1 Zea mays clone 298194 DNA binding protein mRNA, complete cds. |