 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sevir.2G218600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
AP2 |
| Protein Properties |
Length: 478aa MW: 51584.7 Da PI: 9.4311 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.2G218600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 39.8 | 1.1e-12 | 144 | 200 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d s+n ++k+ g ++ +e Aa+a++ a++k++g
Sevir.2G218600.1.p 144 SIYRGVTRHRWTGRFEAHLWDkNSWNEsQNKKGKQGAYDDEEAAARAYDLAALKYWG 200
57*******************8888888775555599******************98 PP
|
| 2 | AP2 | 51.7 | 2.2e-16 | 243 | 294 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
Sevir.2G218600.1.p 243 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 294
89****99**********99966...3.6*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0040008 | Biological Process | regulation of growth |
| GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process |
| GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
| GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MDQKILEREI EGREERERPA GLSLSRPSTS SAHLAFALLS KHQLILPPHH RALPQSLPPS 60
LSLHIFKTAT SRGHHSWPPT SLPLLSLSHT LTMAKPRKNS AAASSTNSNS TASAAAAAGD 120
VGPRAKPKRT RKSVPRESPS QRSSIYRGVT RHRWTGRFEA HLWDKNSWNE SQNKKGKQGA 180
YDDEEAAARA YDLAALKYWG PDTILNFPAS AYEEELKEME GQSREEYIGS LRRKSSGFSR 240
GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAMAYDMAAI EYRGLNAVTN 300
FDLSRYIKWL RPGADGVAAA AAAQDPHPML GGLAQQQLLP PADAAAFQHQ GGAEFPLPPR 360
TSLGHTPTTS ALSLLLQSPK FKEMIERTSA AESGATTSSS SSPPTPSPSP PPPTKAQHQA 420
AGGGGAASPQ CGFPEDIQTF FGCEDVAGVG VGVDVDALFF GDLAAYASPA FHFELDL*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT055111 | 0.0 | BT055111.1 Zea mays full-length cDNA clone ZM_BFc0006C10 mRNA, complete cds. |
