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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.2G021000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 443aa MW: 45758.8 Da PI: 8.3296 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.2G021000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 63.8 | 5.2e-20 | 21 | 156 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkat 86
p f hP+d lv+ yL++ v++ + +++ +d+y +eP dL + ++ +e+ wyf s+ ++k+++g+rk+r+++ +g W+
Sevir.2G021000.1.p 21 PAFDSHPSDVVLVKSYLRPWVAQGVRPPGAFVHAADLYAAEPGDLARrhraaVARDGERAWYFLSPLRTKSPRGRRKSRTVEggTGWWHGE 111
67888*****************999888678**************84355544444788********************88844667**** PP
NAM 87 gkdkevlsk..kgelvglkktLvfy.kgrapkgektdWvmheyrl 128
k+vl+ ++++vg ++++ f +g + +++t W+m e rl
Sevir.2G021000.1.p 112 AGPKPVLDPldGRRKVGYRQSFSFMrRGADGAPVRTGWIMLELRL 156
*******99989999**********567888899*******9887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MLRRPPPVPV PRSSLAAAAA PAFDSHPSDV VLVKSYLRPW VAQGVRPPGA FVHAADLYAA 60 EPGDLARRHR AAVARDGERA WYFLSPLRTK SPRGRRKSRT VEGGTGWWHG EAGPKPVLDP 120 LDGRRKVGYR QSFSFMRRGA DGAPVRTGWI MLELRLHDDD DDGEGGGGLG DQLEGLVLCK 180 VYRSPRHPET AAAPDDGDEE SCAAAETAPG GRHSNAADSD GSSDASLVAV VEPGGKRKAY 240 DDEGSSAATP RRHIKNADGE TSGAAAALMA PGLKKQAADG ENEVYGAATS AAPGIKEKAA 300 ADDENVISGA TTAAARGNEE GKKRAADGDE DSSASTTARK RARTAGDEGP GAASASALAP 360 ALMRKSAVIA LAPAPQQLLC PQCGFQIGAL QAVVAPAKST SETGTRIAQA GAPQGGGRMG 420 DASGKDHSTH RLVLRFSDPK QA*
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