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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.1G341000.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 427aa MW: 44757.9 Da PI: 7.5785 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G341000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.7 | 1.5e-30 | 176 | 235 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
Sevir.1G341000.2.p 176 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILVTTYEGTHNHP 235
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MQEEMEKMKE ENRMLRRVVD RTVRDYYELQ MKLAAYQQQP ADEPKEPEVF LSLGAAAAAT 60 TGGFPEPKRK EQAARRPSVG SDDTDDGKED LGLSLSLRAS SSYEEEKMEA AHDFDGGASV 120 AGADGKAKGY ALLESSKLGA PAAGDLATAG ITSQSVNPAN RKTRVSVRVR CQGPTMNDGC 180 QWRKYGQKVA KGNPCPRAYY RCTVAPGCPV RKQVQRCLED MSILVTTYEG THNHPLPVGA 240 TAMASTTSAA ATFMLLSSTS SSSSISEAAG GGGSAAPPYY LSPYLLNSTS HHSSASPLLS 300 APSSMPSAAP GSASGMQHLN LFGHSSMLAH QQAPHLKYPW SSSEPSHGGS GGLAGSKRPF 360 WSTAGDEKAA TLPDNVGAVM SDPNKFSVAI AAAINSFMGK DSGKDGESSS SKSSNKWGVV 420 ESLPPP*
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