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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.1G341000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 565aa MW: 59863.8 Da PI: 4.8988 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G341000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.2 | 2.3e-30 | 314 | 373 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
Sevir.1G341000.1.p 314 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILVTTYEGTHNHP 373
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 565 aa
Download sequence Send
to blast |
MSSKKKRAAA IDLSVEAERR EEEDRSAGDR RDKDGGVGKK EEQFKEQEEA PPKEETGGEE 60 KVVEVVVDQG GDGTKEEIKY RTQQGEEMEE DKQSEEGHGD DESDGAENRA DGKHVVEASG 120 DGDGDDNHTT MVQDEVSAMQ EEMEKMKEEN RMLRRVVDRT VRDYYELQMK LAAYQQQPAD 180 EPKEPEVFLS LGAAAAATTG GFPEPKRKEQ AARRPSVGSD DTDDGKEDLG LSLSLRASSS 240 YEEEKMEAAH DFDGGASVAG ADGKAKGYAL LESSKLGAPA AGDLATAGIT SQSVNPANRK 300 TRVSVRVRCQ GPTMNDGCQW RKYGQKVAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS 360 ILVTTYEGTH NHPLPVGATA MASTTSAAAT FMLLSSTSSS SSISEAAGGG GSAAPPYYLS 420 PYLLNSTSHH SSASPLLSAP SSMPSAAPGS ASGMQHLNLF GHSSMLAHQQ APHLKYPWSS 480 SEPSHGGSGG LAGSKRPFWS TAGDEKAATL PDNVGAVMSD PNKFSVAIAA AINSFMGKDS 540 GKDGESSSSK SSNKWGVVES LPPP*
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