PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.1G208900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | EIL | ||||||||
Protein Properties | Length: 473aa MW: 51306.9 Da PI: 4.8943 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 351.2 | 2.1e-107 | 62 | 334 | 2 | 266 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXX...............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaa....tgakksn...............ksneqarrkkmsraQDgiLkYMlkemevcnaqGfv 73 +lk+rmwkdqmll++l++r + +a ++ + +rk+m raQDg+L++Mlk+me+cna+Gfv Sevir.1G208900.1.p 62 DLKRRMWKDQMLLNKLEGRAGAFRAVGAEAglssR-----PlvlpgagaeglaeeeTPDVRCQRKAMLRAQDGVLRHMLKMMEACNARGFV 147 9******************9986544443334440.....2556666666666666999******************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T CS EIN3 74 YgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfpl 164 Yg i+e g+p++g+sdsLr+WWk++v+fdr+gp+a++ +++ge l s h+l+++qD+tlgS+Lsal+qhc+ppqr+fpl Sevir.1G208900.1.p 148 YGVIDEAGEPMSGSSDSLRGWWKDNVSFDRAGPMALT-------VPAGECPL--GIASCLHRLQDIQDSTLGSVLSALIQHCEPPQRSFPL 229 ***********************************98.......55666666..458889******************************* PP TT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTT CS EIN3 165 ekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqee 254 e+g++pPWWPtG+e wwg++g ++++qg ppy+kphdlkkawk+s+L+avikhmsp+++++r+l++qsk+lq+kmsake+ +++++l+qee Sevir.1G208900.1.p 230 ERGLAPPWWPTGQEVWWGAQGeVQAHQGVPPYRKPHDLKKAWKISLLSAVIKHMSPRFDQMRKLVWQSKRLQQKMSAKETEVWSKILRQEE 320 ******************************************************************************************* PP T-S--XXXXXX..X CS EIN3 255 kecatvsahss..s 266 + ++++++ + Sevir.1G208900.1.p 321 VLSRRLKTSLQitP 334 *9999999864222 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.1E-112 | 62 | 320 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.2E-63 | 195 | 329 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 7.59E-56 | 198 | 322 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence Send to blast |
MNHGIHGRRH PFSEAAMEHD VAHGGGAGGV PAGEAFEAVL DQLEQEELSD SESGSESIEI 60 SDLKRRMWKD QMLLNKLEGR AGAFRAVGAE AGLSSRPLVL PGAGAEGLAE EETPDVRCQR 120 KAMLRAQDGV LRHMLKMMEA CNARGFVYGV IDEAGEPMSG SSDSLRGWWK DNVSFDRAGP 180 MALTVPAGEC PLGIASCLHR LQDIQDSTLG SVLSALIQHC EPPQRSFPLE RGLAPPWWPT 240 GQEVWWGAQG EVQAHQGVPP YRKPHDLKKA WKISLLSAVI KHMSPRFDQM RKLVWQSKRL 300 QQKMSAKETE VWSKILRQEE VLSRRLKTSL QITPLDNDDD DDDDGLEDVV GRAHDKRKRE 360 LISTSRDNSW SSGSGGSRGG SGELAVMLPE LAALVAADDE SRLSPIDELV KLYCSHAPAD 420 QGGGGHPESG AVAVVPPVEL DMFSAGVVPP DVPFDLIGSC SGLDDVFLLM LD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-48 | 196 | 326 | 1 | 130 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-48 | 196 | 326 | 1 | 130 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.1G208900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ726967 | 0.0 | KJ726967.1 Zea mays clone pUT3668 EIL transcription factor (EIL5) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004955019.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 5 protein | ||||
Swissprot | Q9LX16 | 1e-89 | EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | K3YS63 | 0.0 | K3YS63_SETIT; Uncharacterized protein | ||||
STRING | Si017107m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65100.1 | 1e-86 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Sevir.1G208900.1.p |
Publications ? help Back to Top | |||
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