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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sevir.1G187500.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
E2F/DP |
| Protein Properties |
Length: 470aa MW: 50927.9 Da PI: 4.6886 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.1G187500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 85 | 6e-27 | 150 | 215 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL+llt+kf++ll+++++gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg
Sevir.1G187500.1.p 150 RYDSSLGLLTKKFINLLKQAPDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 215
6899******************************...99..****************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009733 | Biological Process | response to auxin |
| GO:0010090 | Biological Process | trichome morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0051302 | Biological Process | regulation of cell division |
| GO:0051446 | Biological Process | positive regulation of meiotic cell cycle |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 470 aa
Download sequence Send
to blast |
MSGVGSGRPP AAQKILQSLR PPLAFASPSR PPFAAPDDYH RFPTPAAAAA PAATSGGVGA 60
GGAADSIEEG LVIRTPLKRK ATSEENDAAE SSECIITSTG FTGSPMLTPV SGKTVKTSKS 120
KAKNNKAGPQ TPTSNVGSPL NPATPAGTCR YDSSLGLLTK KFINLLKQAP DGILDLNNAA 180
ETLEVQKRRI YDITNVLEGI GLIEKTLKNR IRWKGLDDSG VDLDNGISAL QAEVENLSLQ 240
EQALDERISD MREKLRGLTE DENNQRWLYV TEDDIKGLPC FQNETLIAIK APHGTTLEVP 300
DPDEAGDYLQ RRYRIVLRST MGPIDVYLVS QFDEKFEELG GVETPARHAN MSRHHTVEDF 360
NATNAGQCST SMDVVHNVQQ NQRTPQDPNA SHDFGGMTRI IPSDVDTDAD YWLLTEGDVS 420
ITDMWKTAPE VQWDQMDFLS EEVVTPRAQN QQPVAVGGPH MQVPSMDKP*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
