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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sevir.1G145300.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
G2-like |
| Protein Properties |
Length: 402aa MW: 43242.3 Da PI: 8.7793 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.1G145300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.1 | 3.5e-32 | 233 | 288 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
kpr++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
Sevir.1G145300.1.p 233 KPRRCWAPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 288
79****************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MDPPLPSPQY AHRRRCSEYL LALEEERRKI QVFKRELPLC LQLVTQTIEG MKSQMHGVGS 60
EGTVSDHGPV LEEFMPLKPS LSLSSDEHES ADDAAATNDV GKKEKAAETH GRQSPPTEAN 120
KAMPDWLQSV QLWSQEPQQQ PSSPRKELLC KPVALNTRKA GDAFQPFVKE KRAEMPASPT 180
TAAASSAVVG DSCDKVATDT SEKHSDKEMN KDAKDMGKYS KDKEGQSQAP NRKPRRCWAP 240
ELHRRFLQAL QQLGGSHVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPNSTTVVQS 300
TSTSAAQPAP QFVVVGGIWV PPAEYATAAA AASAAAAAQS QVQLAGDASG TANTVYAPVA 360
TLPSGTRQGQ RQSSRCSGGR RSGDASSDSP AVSSSSHTTS A*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 9e-13 | 233 | 286 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 9e-13 | 233 | 286 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 9e-13 | 233 | 286 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 9e-13 | 233 | 286 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-12 | 233 | 286 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that may play a role in response to nitrogen. May be involved in a time-dependent signaling for transcriptional regulation of nitrate-responsive genes. Binds specifically to the DNA sequence motif 5'-GAATC-3' or 5'-GAATATTC-3'. Represses the activity of its own promoter trough binding to these motifs. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by nitrate. {ECO:0000269|PubMed:23324170}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT035536 | 6e-79 | BT035536.2 Zea mays full-length cDNA clone ZM_BFb0068J14 mRNA, complete cds. |
| GenBank | KJ726838 | 6e-79 | KJ726838.1 Zea mays clone pUT3378 G2-like transcription factor (GLK5) mRNA, partial cds. |
