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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.1G100300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 355aa MW: 37572.8 Da PI: 5.0921 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G100300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 73.8 | 2.3e-23 | 250 | 312 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++
Sevir.1G100300.1.p 250 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAESLRSENSSLRAELERIRKEYEQLLSQN 312
89**********************************************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MGSNEPSTPS KAPKASEQDQ PPATTSGATA SVYPEWPSFQ AYSAMPPHGF FPPTVAANPQ 60 AHPYMWGAQP MVPPYGTPQS PYVMYPPGTV YAHPSTTPGM HPFSHYPMPT NGHAETPGAA 120 PSAPEMNGKS EPGRTSAPSA NGITSHSESG SESESEGSDA NSQNDSHSKD NDGKEDGSSQ 180 NGISYSASQG MLNQSMSMIP IQPGAMVGVP GSTANLNIGM DYWAAPGSAA IPATQGKATA 240 GSARGDQWDE RELKKQKRKQ SNRESARRSR LRKQAECEEL GQRAESLRSE NSSLRAELER 300 IRKEYEQLLS QNASLKEKLG ATGDSIPDMN EQNDGDGSGH QKQPDSDAQP GNES*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 266 | 272 | RRSRLRK |
2 | 266 | 273 | RRSRLRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728260 | 0.0 | KJ728260.1 Zea mays clone pUT6537 bZIP transcription factor (bZIP14) mRNA, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G32150.1 | 2e-85 | basic region/leucine zipper transcription factor 68 |
Publications
? help Back to Top |
- Tabata T,Nakayama T,Mikami K,Iwabuchi M
HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143] - Tabata T, et al.
A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif. Science, 1989. 245(4921): p. 965-7 [PMID:2772648] - Mikami K, et al.
Developmental and tissue-specific regulation of the gene for the wheat basic/leucine zipper protein HBP-1a(17) in transgenic Arabidopsis plants. Mol. Gen. Genet., 1995. 248(5): p. 573-82 [PMID:7476857] - Nakayama T,Okanami M,Meshi T,Iwabuchi M
Dissection of the wheat transcription factor HBP-1a(17) reveals a modular structure for the activation domain. Mol. Gen. Genet., 1997. 253(5): p. 553-61 [PMID:9065688] - Okanami M,Meshi T,Tamai H,Iwabuchi M
HALF-1, a bZIP-type protein, interacting with the wheat transcription factor HBP-1a contains a novel transcriptional activation domain. Genes Cells, 1996. 1(1): p. 87-99 [PMID:9078369]
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