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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.1G049600.7.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 352aa MW: 37740.2 Da PI: 10.2388 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G049600.7.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.1 | 2.8e-11 | 159 | 199 | 3 | 43 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
+ k rr+++NReAAr+sR+RKka+i++Le+ L++ +
Sevir.1G049600.7.p 159 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRIRLSQLEQ 199
67999*************************86555555444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MGDRPWQQPP EQASYPHAGM IQAASSSAHG GIIRKEPGGG YDMAEFDQAL FLYLNSQDQT 60 SAAHHQDQPQ TLNIFPSQPM HIAEPAPKGS MGTSNTAPIA GAGPSKQPPP PSNHPSRPTP 120 AALKDGKPAG VKREGSSGAA TGSGTPSTSN QQEGPRTPDA KTLRRLAQNR EAARKSRLRK 180 KAYIQNLETS RIRLSQLEQE LHRSRNQGAV FGGGALSGSN GGLSPEAAWF DMEHARWQEE 240 HGKMMRHLRA ALEAADQQHP AAPAPAPAAD AQLRQLVDAA AAHHGVLADL KAAVASADAF 300 HLVSGAWASA AERCFLWIGG FRPSELIKDS RLDRRWRRGW LTYLQQCKGR A*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004184 | 1e-54 | AP004184.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1225_F07. |
GenBank | AP014958 | 1e-54 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | CP012610 | 1e-54 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |