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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.1G049600.6.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 351aa MW: 37584 Da PI: 10.1193 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G049600.6.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.2 | 2.8e-11 | 158 | 198 | 3 | 43 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
+ k rr+++NReAAr+sR+RKka+i++Le+ L++ +
Sevir.1G049600.6.p 158 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRIRLSQLEQ 198
67999*************************86555555444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MGDRPWQQPP EQASYPHAGM IQAASSSAHG GIIKEPGGGY DMAEFDQALF LYLNSQDQTS 60 AAHHQDQPQT LNIFPSQPMH IAEPAPKGSM GTSNTAPIAG AGPSKQPPPP SNHPSRPTPA 120 ALKDGKPAGV KREGSSGAAT GSGTPSTSNQ QEGPRTPDAK TLRRLAQNRE AARKSRLRKK 180 AYIQNLETSR IRLSQLEQEL HRSRNQGAVF GGGALSGSNG GLSPEAAWFD MEHARWQEEH 240 GKMMRHLRAA LEAADQQHPA APAPAPAADA QLRQLVDAAA AHHGVLADLK AAVASADAFH 300 LVSGAWASAA ERCFLWIGGF RPSELIKDSR LDRRWRRGWL TYLQQCKGRA *
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004184 | 1e-54 | AP004184.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1225_F07. |
GenBank | AP014958 | 1e-54 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | CP012610 | 1e-54 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |