 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.1G024800.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
BES1 |
Protein Properties |
Length: 420aa MW: 42016.1 Da PI: 10.2444 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G024800.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 138 | 9.3e-43 | 55 | 166 | 4 | 119 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspess 93
r+p++ ErEnn+rRERrRR ++++iy+ LRa+Gny lp +DnneVlkA creAGwvve+DGttyr+gs+p+ g+ a +sp ss
Sevir.1G024800.1.p 55 ARTPSQVERENNRRRERRRRLVSSRIYTALRAEGNYTLPRNCDNNEVLKAVCREAGWVVEPDGTTYRRGSRPPrGVLGGFGATAPVSPASS 145
799**********************************************************************333344444444566666 PP
DUF822 94 lqsslkssalaspvesysaspksssf 119
+ + + p++sy ++ sss+
Sevir.1G024800.1.p 146 TPP-----TPTPPTASYGLTLGSSSS 166
552.....233445555555555544 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 420 aa
Download sequence Send
to blast |
MMNGGGGMVA AGAGGAGGSG GGGGGDRDRG KGIVFGNGYG SARGRAKGRA RNAPARTPSQ 60 VERENNRRRE RRRRLVSSRI YTALRAEGNY TLPRNCDNNE VLKAVCREAG WVVEPDGTTY 120 RRGSRPPRGV LGGFGATAPV SPASSTPPTP TPPTASYGLT LGSSSSSSSY LTLGGGSGGI 180 FYGAAGGGGS SSGLPAWFQR LSQAGGQASS STTASAPVTP QNASPPQLTL ARWAAEDNAA 240 AAAAAAAAAN LQPRWAAGAG PSPYAPQAQQ QPLTMPPSPV GGGSGAVDPV LLLAGIQISA 300 AANNNNNYRR PPRPYTYSPL GTPGASSFAA GASSSRMGTP GPVQSSGGPW APAPAPAPAP 360 APAPAPAARG GGDGDGDVEM EPREFSFAWD GEVSREDYTD EDGLELTLGN SKTRADRRG*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 2e-19 | 76 | 133 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 2e-19 | 76 | 133 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 2e-19 | 76 | 133 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 2e-19 | 76 | 133 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |