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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.1G022000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
Dof |
Protein Properties |
Length: 332aa MW: 35040.2 Da PI: 8.6752 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G022000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 119 | 1.7e-37 | 71 | 130 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+++al+cprC+stntkfCyynnys++qPryfCkaCrr Wt GG+lrnvPvGgg+rk+k++
Sevir.1G022000.1.p 71 QDQALNCPRCNSTNTKFCYYNNYSMTQPRYFCKACRRNWTLGGTLRNVPVGGGSRKKKQN 130
7899*****************************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MEKVAIVKQL GNVDEDRSFG VVCWCRVPEA AMVASPPREE AVAARNVKAK QARQQQVVAS 60 GSGERKPRPQ QDQALNCPRC NSTNTKFCYY NNYSMTQPRY FCKACRRNWT LGGTLRNVPV 120 GGGSRKKKQN PAGGSSASSA PPASSSSSND SKKMNIVTQQ LLTMPTATTP MPADFPNVLP 180 TFMSIGGSFQ LPSSDQHSLP FAPLSLSSNP GTMLSFMERG GFLDGSSSNG MASLPILPVP 240 SFGVMQHGHG MMGGSSDQQM MGPLQGVDQE VKPPMATAGG SGLQQWPSST TQEQQVVGGD 300 GSADNNNDNN MDGGASGSSS GVERYWQGGF N*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. May enhance the DNA binding of the bZIP transcription factor Opaque-2 to O2 binding site elements. |