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Plant Transcription
Factor Database
|
Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sevir.1G021500.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
G2-like |
| Protein Properties |
Length: 514aa MW: 56833 Da PI: 6.2661 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.1G021500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 99.9 | 1.7e-31 | 125 | 178 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
Sevir.1G021500.1.p 125 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 178
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 514 aa
Download sequence Send
to blast |
MVEQYKMVAR EEQVMKEIKD KGVLVEILED DEERSIDNKL LDLNEGLDVE SEEGEVGDDE 60
EDEGEEGDEG GSTIDVGGSG SSSNNSSTNN NSESKKGDIK GGSKSEGSGE QRVPTVRQYN 120
RSKLPRLRWT PDLHMAFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK 180
LDQDGRPRGA ISSVYSPVDF HFMRGDRRFQ EMSFFQRAAV LSSSKLEHGS FFASRNCSAP 240
ELSRLYGLLQ HRPTPQTFDF RNSRNHEWAS SHREAMISRK DVTPPSTAPH QTHPLAGSAL 300
LRSERRWWPF TDAGAAAATG ERRAETGREA DFANSIGSSS RPHLCATAVS VDPRLPFRWR 360
PAGGSGRDVV GYPGNNAKIT TRSSDPVVID EALDPQQLER QRDSAMPAYN DEACRKRSLP 420
AETQDETSDL QLSLSPTTVM EAKKRKTTAL SGEQDIMDTR ELSISLSLSP PAAASMQKRQ 480
QEKTRRSNDS RSSGEAVLGQ STLDLTMSIR ALE*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-17 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-17 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-17 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-17 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | JX540607 | 2e-70 | JX540607.1 Paspalum vaginatum clone StvCtg_09077 microsatellite sequence. |
