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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sevir.1G015200.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
NAC |
| Protein Properties |
Length: 355aa MW: 39421.7 Da PI: 7.5183 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.1G015200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 169.6 | 1e-52 | 10 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgk 88
+ppGfrFhPtdeel+ +yL+kkv+ ++++l +vi+e+d++k+ePwdL+ ++ ++ + ewyfFs++dkky+tg+r+nrat++g+Wkatg+
Sevir.1G015200.1.p 10 VPPGFRFHPTDEELLYYYLRKKVAYEPIDL-DVIREIDLNKLEPWDLKDrcRIGTGPQdEWYFFSHKDKKYPTGTRTNRATTAGFWKATGR 99
69****************************.9***************943455444445******************************** PP
NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
dk+++ + +g++vgl+ktLvfy+grap+g+ktdW+mheyrl
Sevir.1G015200.1.p 100 DKAIFLSnGGRKVGLRKTLVFYTGRAPHGKKTDWIMHEYRL 140
****99868899***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MHPSCSPLTV PPGFRFHPTD EELLYYYLRK KVAYEPIDLD VIREIDLNKL EPWDLKDRCR 60
IGTGPQDEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIFLSNGGR KVGLRKTLVF 120
YTGRAPHGKK TDWIMHEYRL DDDNVEVPIT EDGWVVCRVF KKKSIQRGFD QQQGMAAAVV 180
HDEELHSFQH SPTGGATTPV DQKHGLHQLM HGGFFPAFDP SMHLPHLTNA EVPTLGTPAF 240
ISGTPAAVAV NPLGMGSSPH NLVKLTTSSC GTAGDMLLNG GERFGAVAAA DWSILDKLLA 300
SHQNLDQLFH GKFGGTPVGV SQHYQQRQQQ LMEMSATSLQ RLPLHYLGCE TADL*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-50 | 8 | 164 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-50 | 8 | 164 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-50 | 8 | 164 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-50 | 8 | 164 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 3swm_B | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 3swm_C | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 3swm_D | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 3swp_A | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 3swp_B | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 3swp_C | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 3swp_D | 1e-50 | 8 | 164 | 18 | 170 | NAC domain-containing protein 19 |
| 4dul_A | 1e-50 | 8 | 164 | 15 | 167 | NAC domain-containing protein 19 |
| 4dul_B | 1e-50 | 8 | 164 | 15 | 167 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
