![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.9G576800.1.p |
Common Name | LOC101780421, SETIT_035728mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
GRAS |
Protein Properties |
Length: 443aa MW: 46450.3 Da PI: 6.0077 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.9G576800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Sit&pid=Seita.9G576800.1.p) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 252.7 | 1.4e-77 | 90 | 437 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
ve+L e+A+ ++gd a+++L + g+p+ R a y++ AL+ l++ + ++s+ ++ +++l a+k+fse+sP+l+
Seita.9G576800.1.p 90 VEQLAEAATLAEAGDVLGARETLLAMAPDIGAPGTPLLRSALYLKDALRVALSG-------SSSSSNPNSVVLIKKLGAYKAFSEISPVLQ 173
789**************************************************9.......334444444569****************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
f+h+t+ qa+l+ ++ + ++H++D+di+ G QW++L+++La R+ + + l++T+++s + + el+ ++++L++fA+e++v+f+f ++
Seita.9G576800.1.p 174 FAHFTCVQAVLDHLAAAACIHVLDLDIGVGDQWASLMHKLARRR-PGAALKVTALVSGT--ASLELQLVHDNLSSFAAETRVQFRFAAFNL 261
*****************************************985.5589********44..99*************************944 PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
++++ el +++ +gEa+aV+l r + vL+lv++l +k+vv v++ +d+++ +F++++l+a+++++++++s++a
Seita.9G576800.1.p 262 DAVNPAELLAIAAGEGEAIAVHLPAGSVRGP------------VLELVRRLGAKLVVSVDRGCDRGELPFAAHLLQAFQWCASMLESMDAV 340
444444444456666*********9877777............************************************************ PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkd 364
+++ s ++Er +++++++++v + ++ ++ e+ Wr++l +aGF pvp s++a++qa++l++kv+++g+rv+++ g+lvl W++
Seita.9G576800.1.p 341 VGAGS---DVIERLVIQPRVESCVLRRYRA-AANGEKTPPWRAMLASAGFVPVPASSFAEAQADSLVKKVPVRGFRVQKRgAGELVLHWQR 427
97766...58*******************9.99999******************************************987899******* PP
GRAS 365 rpLvsvSaWr 374
+L+svSaWr
Seita.9G576800.1.p 428 GELLSVSAWR 437
*********8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MPLGAAEACC WEAPCAAAQP QEDNTFLRWI IGGDDGSSAV MDHIPASSAH QPLPSLPPLD 60 TPPPPNFALK PNAEAEAEAA NDGTTAALAV EQLAEAATLA EAGDVLGARE TLLAMAPDIG 120 APGTPLLRSA LYLKDALRVA LSGSSSSSNP NSVVLIKKLG AYKAFSEISP VLQFAHFTCV 180 QAVLDHLAAA ACIHVLDLDI GVGDQWASLM HKLARRRPGA ALKVTALVSG TASLELQLVH 240 DNLSSFAAET RVQFRFAAFN LDAVNPAELL AIAAGEGEAI AVHLPAGSVR GPVLELVRRL 300 GAKLVVSVDR GCDRGELPFA AHLLQAFQWC ASMLESMDAV VGAGSDVIER LVIQPRVESC 360 VLRRYRAAAN GEKTPPWRAM LASAGFVPVP ASSFAEAQAD SLVKKVPVRG FRVQKRGAGE 420 LVLHWQRGEL LSVSAWRLTS SS*
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