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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.9G424200.3.p |
Common Name | LOC101767047, SETIT_036527mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 336aa MW: 37389.3 Da PI: 9.3488 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.9G424200.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.4 | 2e-10 | 50 | 92 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
k+ rr+++NReAAr+sR+RKka++++Le +L + ++L+
Seita.9G424200.3.p 50 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 92
5899*************************86666666555554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MADASSRTDT STVVDTDDKN QRLENGQSGA IVMASNSSDR SDRSDKPMDQ KVLRRLAQNR 60 EAARKSRLRK KAYVQQLESS KLKLASLEQE LQKARQQGIF ISSSGDQTHA MSGNGAMTFD 120 LEYSRWQEEQ NKQINELRTA VNAHASDSDL RLIVDGIMAH YDEIFRLKGV AAKADVFHIL 180 SGMWKTPAER CFLWLGGFRS SELLKLLVNQ LEPLTEQQLM GLSNLQQSSQ QAEDALSQGM 240 EALQQSLAET LAGSLGPSGS SGNVANYMGQ MAMAMGKLGT LENFLRQADN LRQQTLHQMQ 300 RILTIRQAAR ALLAIHDYFS RLRALSSLWL ARPRE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727805 | 0.0 | KJ727805.1 Zea mays clone pUT5757 bZIP transcription factor (bZIP52) mRNA, partial cds. |