|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.9G421000.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
bZIP |
Protein Properties |
Length: 269aa MW: 28222.6 Da PI: 10.3939 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.9G421000.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 47.2 | 4.7e-15 | 173 | 214 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
+r +r++kNRe+A rsR+RK+a++ eLe+k+ +Le+eN++L+
Seita.9G421000.1.p 173 RRKKRMIKNRESAARSRARKQAYTNELENKISQLEEENERLR 214
799**************************************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MGAKAMSSHG SGAAGGGGGG AALSRQGSVC SLTFGEADGQ LHGVNLDDLL RAGRKTVDEV 60 WRDIQGAGGG ACPRAQMTLE DFLSRAGTSA PADAAGNGAC ARSWGAHQLY QPAPAPQLGR 120 HHQPAVGRPV PRPLGVGAGP VLEALYYEGG AAAAAGGNRA GPEHGVAERS NERRKKRMIK 180 NRESAARSRA RKQAYTNELE NKISQLEEEN ERLRGHKMTL AVVAVGSAVL RSELRRGQAP 240 EPVVQYVPQQ EVKNQLQLQL RRTNSANF*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK361423 | 9e-37 | AK361423.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1140E18. |