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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Seita.9G419900.1.p |
| Common Name | LOC101784320, SETIT_034616mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
EIL |
| Protein Properties |
Length: 648aa MW: 72140.8 Da PI: 4.8208 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.9G419900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 510.7 | 6.6e-156 | 78 | 467 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpveg 86
eel++rmw+d+m+lkrl+e ++++ +d+ aa g++k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+g
Seita.9G419900.1.p 78 EELERRMWRDRMKLKRLRELQQSRGKDQAAAgsgvgDGSSKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGIIPEKGKPVSG 168
8***********************9999999999887899999************************************************ PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S- CS
EIN3 87 asdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGk 177
asd+LraWWkekv+fdrngpaai+kyqa+n++++ e++l t++++++hsl+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWPtG+
Seita.9G419900.1.p 169 ASDNLRAWWKEKVRFDRNGPAAIAKYQADNAVPGAENEL-TSGTASPHSLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPTGD 258
***************************************.55************************************************* PP
-HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX... CS
EIN3 178 elwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss... 265
e+ww+elg++kdqg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake ++lsv++qee+++ ++++ +
Seita.9G419900.1.p 259 EEWWPELGIPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLSVVKQEEELYLKLHPGARppv 349
*************************************************************************************944445 PP
..XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXX.XXXXXXXX.. CS
EIN3 266 ..slrkqspkvtlsceqkedvegkkeskikhvqavktta............................gfpvvrkrkkkps.esakvsskev 325
++ ++++s++ ++dv+ +e k ++ ++k++ ++++++kr+++ s e++ + ++
Seita.9G419900.1.p 350 ptGGIASAISFNASSS-EYDVDIVDECKGDEAGNQKAAVtdptafnlgaailsdkflmptpmkeetaEVEFIQKRNAPGSaEPELMLNN-R 438
4322335556666655.99***7777777877777776688999********************************8865145556555.6 PP
....XXXXXXX.XXXXXXXXXXXXXXXXX CS
EIN3 326 srtcqssqfrgsetelifadknsisqney 354
++tc++ q++++++ +f d+n++++++y
Seita.9G419900.1.p 439 VYTCNNVQCPHNDYGYGFLDRNARNSHQY 467
7**************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001666 | Biological Process | response to hypoxia |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009873 | Biological Process | ethylene-activated signaling pathway |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0071281 | Biological Process | cellular response to iron ion |
| GO:0005634 | Cellular Component | nucleus |
| GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 648 aa
Download sequence Send
to blast |
MMGGGLMMDQ GMVFPGVHNF VDLLQQNGDK NLGFGSLMPQ TSSGDQCVMG EGDLVDPPPE 60
SFPDAGEDDS DDDVDDIEEL ERRMWRDRMK LKRLRELQQS RGKDQAAAGS GVGDGSSKPR 120
QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK 180
VRFDRNGPAA IAKYQADNAV PGAENELTSG TASPHSLQEL QDTTLGSLLS ALMQHCDPPQ 240
RRYPLEKGVP PPWWPTGDEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP 300
DIEKIRRLVR QSKCLQDKMT AKEISTWLSV VKQEEELYLK LHPGARPPVP TGGIASAISF 360
NASSSEYDVD IVDECKGDEA GNQKAAVTDP TAFNLGAAIL SDKFLMPTPM KEETAEVEFI 420
QKRNAPGSAE PELMLNNRVY TCNNVQCPHN DYGYGFLDRN ARNSHQYTCK YNDPLPQSTE 480
NKPPPPQPPQ SQAFQGGFNQ PNQALNNLDF SLPMDGQRSI AELMNMYDNN FMTNKNMSSD 540
SVSIMEGRPN ALPQRMQMDD GFFGQGNGVF DDVNSMMQQP QQAPVQQQQQ PQPQQQFFIR 600
DDTPFVSQMG DISGTSEFRF GSSFNMSSTV DYPGAAQQKN DGPNWYY*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Yang C, et al.
MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
Plant Physiol., 2015. 169(1): p. 148-65
[PMID:25995326] - Yang C, et al.
Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
Plant J., 2017. 89(2): p. 338-353
[PMID:27701783] - Qin H, et al.
The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
PLoS Genet., 2017. 13(8): p. e1006955
[PMID:28829777] - Kuroha T, et al.
Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
Science, 2018. 361(6398): p. 181-186
[PMID:30002253]
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