 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Seita.9G167300.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
Dof |
| Protein Properties |
Length: 314aa MW: 31372.3 Da PI: 8.8405 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.9G167300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 113.7 | 8.1e-36 | 87 | 142 | 5 | 60 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
+cprC s++tkfCyynny++sqPr+fC+aCrryWt GG+lrnvP+Gg++rk+ +
Seita.9G167300.1.p 87 GEQCPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPR 142
579*************************************************9865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MAGQVMEAHA HHQARLQPPA VPPFAPLPPS CKNDVHHFPA AMATPGSNAA AAADMAAYLQ 60
QLQDTAAAAA EANKSSSGGN GGGAARGEQC PRCASHDTKF CYYNNYNTSQ PRHFCRACRR 120
YWTLGGSLRN VPIGGSTRKR PRLAHHHHHH QQQPAAARRA PVFGLGLGGG GGAHPPMPSS 180
SSSQAGGLLG SLFALGAAAP LLDGPAAPML EGRGAGLFDL GLGLPVPGGA VGGAGDAGVQ 240
MQGLGLIRGG GGGHAGGASS GLFWPAGLLD SDSVDTWKML PGVGAGAMWP EFSAAAAPAP 300
QAGGLLHGGA QLM*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC582406 | 8e-90 | KC582406.1 Sorghum bicolor dof9 protein (dof9) gene, complete cds. |
