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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.9G154300.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
YABBY |
| Protein Properties |
Length: 196aa MW: 21867.1 Da PI: 8.8782 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.9G154300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 235 | 1.7e-72 | 5 | 169 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlks.nvekees 91
+++ + e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+ q l++++hl ++e+lkv++ ++++ n+ ++
Seita.9G154300.1.p 5 QIVPALEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSLPVQNHLCL----LVQENLKVHNFSFSTeNYCEYAP 91
567788*******************************************************654....57788888888876415666666 PP
YABBY 92 astsvssekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
+s++ ++ ++ s++ d++ ++ +v PekrqrvPsaynrfikeei+rikasnP ishreafs+aaknWahfP+ihfgl
Seita.9G154300.1.p 92 SSSKYRMPTMfSTKGDQD--HMLHVRAAPEKRQRVPSAYNRFIKEEIRRIKASNPAISHREAFSTAAKNWAHFPNIHFGL 169
666666666644444433..34567889**************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 196 aa
Download sequence Send
to blast |
MSAPQIVPAL EHVCYVHCNF CNTILAVSVP SNSMLNIVTV RCGHCTSLLS VNLRGLIQSL 60
PVQNHLCLLV QENLKVHNFS FSTENYCEYA PSSSKYRMPT MFSTKGDQDH MLHVRAAPEK 120
RQRVPSAYNR FIKEEIRRIK ASNPAISHRE AFSTAAKNWA HFPNIHFGLG PLESSKKLDE 180
AIGAAGHPHK VQDLY*
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