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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.9G107700.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
GRF |
Protein Properties |
Length: 546aa MW: 58565.2 Da PI: 7.2758 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.9G107700.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 74.9 | 8.3e-24 | 167 | 210 | 2 | 45 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e
Seita.9G107700.2.p 167 LEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKHVEG 210
69***************************************986 PP
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2 | QLQ | 59.6 | 9e-21 | 99 | 135 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
++FT++Q+ +L++Q+l+yKyLaan P+P+ Ll++i++
Seita.9G107700.2.p 99 GPFTPSQWIELEHQALIYKYLAANIPIPHSLLVPIRR 135
59*********************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 546 aa
Download sequence Send
to blast |
MDITYESVLL IRFLILAAST LFQIFVSFSC LYPALGLCLG NACISVVISM KQYMFLAVPC 60 WLSLLCCSSL TLPACFIPAG LSSVSLSSSM QGAMARVRGP FTPSQWIELE HQALIYKYLA 120 ANIPIPHSLL VPIRRSLASS PYPPSYFGTS TLGWGSFQLG YSGNADLEPG RCRRTDGKKW 180 RCSRDAVADQ KYCERHMNRG RHRSRKHVEG QPGHAAKAMS AAVAAAAATQ PAALAASGAG 240 ATAAGLTVSQ HQQPVKSYAA GATDPCSLQY NRELVNKQNE SDNMQDSDNL SMLTSMSTRN 300 PGSLFPFSKQ NNPFEVTSSR PEFGLVSSDS LMSSPHSSLE NVNLLSSQSL NENQSSASLQ 360 HFVDWPRTPA QGGLSWPDAE DMQAQRSQLS VSAPMASSEL SSASTSPIHE KLMLSPLKLS 420 REYSPIGLSI AASRDEVSQL EANWATMFRD SSMGGPLGEV LTKNGNAEAK NCLSAPLNLL 480 TDFWDSSPGM ESSPVGVLQK TTFGSVSSST GSSPRMENHG AYDGISNLRD DLGSIVVSHP 540 NIRLL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT063759 | 0.0 | BT063759.1 Zea mays full-length cDNA clone ZM_BFc0104G18 mRNA, complete cds. |