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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.9G080000.1.p |
| Common Name | LOC101753232, SETIT_036412mg |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
G2-like |
| Protein Properties |
Length: 350aa MW: 37380.3 Da PI: 6.7945 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.9G080000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.6 | 1.1e-31 | 222 | 277 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH++Fv a++qLGG+++AtPk+i+e+m+v+gLt+++vkSHLQkYRl+
Seita.9G080000.1.p 222 KARRCWSPELHRQFVAALHQLGGPQVATPKQIREVMQVDGLTNDEVKSHLQKYRLH 277
68****************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010092 | Biological Process | specification of organ identity |
| GO:0010629 | Biological Process | negative regulation of gene expression |
| GO:0048449 | Biological Process | floral organ formation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005829 | Cellular Component | cytosol |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MGLDVAEIGM GLDLGLDLKL FAARSAGGMA AAAAKGAPAG IEACIRSLEE ERRKIEVFRR 60
ELPLCVRLLA DVIEELKDEA AKRGEDLELE MKADDGDKKK WMSTAQLWVD SDAKSKSEKE 120
KRSEMTSPEP KLLGSPMPIR AVPAVAPPPP PCFRGDDNAA STVGLPGLSL LPPAAKTSIS 180
PAPAVDEHRQ NATARFSAPM SPSGPALNLH AQTQQQQQQA RKARRCWSPE LHRQFVAALH 240
QLGGPQVATP KQIREVMQVD GLTNDEVKSH LQKYRLHNRR SPGVAPVSQS IMLVGGLWVP 300
QEQTSSQSGS PQGPLQFSGS GMAVSAATVG GDGSSSDEDD KSDESYSRK*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 6e-14 | 222 | 275 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 6e-14 | 222 | 275 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 6e-14 | 222 | 275 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 6e-14 | 222 | 275 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | EU962086 | 1e-102 | EU962086.1 Zea mays clone 240112 DNA binding protein mRNA, complete cds. |
| GenBank | KJ728055 | 1e-102 | KJ728055.1 Zea mays clone pUT6201 G2-like transcription factor (GLK44) mRNA, partial cds. |
| GenBank | KJ728056 | 1e-102 | KJ728056.1 Zea mays clone pUT6202 G2-like transcription factor (GLK44) mRNA, partial cds. |
