|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.9G055600.1.p |
Common Name | SETIT_035062mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
bZIP |
Protein Properties |
Length: 416aa MW: 42907.6 Da PI: 4.7408 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.9G055600.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 41.9 | 2.2e-13 | 224 | 275 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
+ +rrkq+NRe+ArrsR RK a + eLe v++L eN++L +l +++
Seita.9G055600.1.p 224 RLQRRKQSNRESARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVNQKF 275
679**************************************98887777665 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus |
GO:0071333 | Biological Process | cellular response to glucose stimulus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MERVFSVEEI PNPYWTPTQP QAAAAGAVAA PGGGGGGGGA GGAGDEVGAM NRCSSEWYFQ 60 KFLEEAVLDS PGPVPGVGRG GGGVGVGVEA AESKPLGVGA ASNAVVDPVE YNAMLKQKLE 120 KDLAAVAMWR ASGATPPERP AAGSSLPNVD VSHAGPVNPI GGNVIPVQNK LAGAPGGPSG 180 PQVVQNADML VKQATSSSSR EQSDDDDMEG EAETTGNANP VQQRLQRRKQ SNRESARRSR 240 SRKAAHLNEL EAQVAQLRVE NSSLLRRLAD VNQKFNEAAV DNRVLKADVE TLRAKVKMAE 300 DSVKRVTGMN ALFPPVSDMS SLSMPFNGSP SDSTSDAAVP VQDDPSSYFA SPSEMGGNGG 360 YMPEIASSAQ EDDDLVNAAL AAGKMGRTAS LQRVESLEHL QKRMCGGPAS SGSTS*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}. |
Publications
? help Back to Top |
- Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif. J. Biol. Chem., 2001. 276(17): p. 14139-52 [PMID:11133985] - Yang D,Wu L,Hwang YS,Chen L,Huang N
Expression of the REB transcriptional activator in rice grains improves the yield of recombinant proteins whose genes are controlled by a Reb-responsive promoter. Proc. Natl. Acad. Sci. U.S.A., 2001. 98(20): p. 11438-43 [PMID:11572990] - Cheng S,Wang Z,Hong M
Rice bZIP protein, REB, interacts with GCN4 motif in promoter of Waxy gene. Sci. China, C, Life Sci., 2002. 45(4): p. 352-60 [PMID:18759022]
|