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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.8G175700.1.p |
Common Name | SETIT_027519mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
Dof |
Protein Properties |
Length: 263aa MW: 27625.1 Da PI: 9.8855 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.8G175700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 114.5 | 4.6e-36 | 40 | 99 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+e+ l+cprC+stntkfCyynn s++qPryfCkaCrr Wt+GG+lrn+PvGgg+rknk++
Seita.8G175700.1.p 40 QEQGLNCPRCNSTNTKFCYYNNNSMTQPRYFCKACRRNWTQGGTLRNIPVGGGSRKNKQN 99
68899****************************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MVASPPREEA DPARNVKAKQ AQQQQVAASG ASERKPRPQQ EQGLNCPRCN STNTKFCYYN 60 NNSMTQPRYF CKACRRNWTQ GGTLRNIPVG GGSRKNKQNR AGSSSSSSPA PPAPSSSSTN 120 SKKMNLTQQL LMMPTAMAPM PADFPIVLPT FMSTGGGGFE LPSSDHHSLP FPPLSLPSNP 180 GTTPSLLDML TGGFLDGGIG ALPFLPTPPS FGAMQHGHGI MVGSHDQQLG VDQALKPPMA 240 ATGGSGLQQW PSSAAQDQHG SI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. May enhance the DNA binding of the bZIP transcription factor Opaque-2 to O2 binding site elements. |