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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.8G149900.1.p |
| Common Name | SETIT_027897mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
FAR1 |
| Protein Properties |
Length: 164aa MW: 19642.3 Da PI: 9.5549 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.8G149900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 51.8 | 2.7e-16 | 30 | 116 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
+f+n++A++ GFs r + ++++ + ++r++vCskeg +++ + ++ +rr+r++tr +C +++++ + + w+v+k HnH++
Seita.8G149900.1.p 30 EFFNAFARNKGFSGRGRLHTQQ----TKMSRQYVCSKEGAGQPKFLNrETMKRRPRPVTRFDCPFEVVMRHKPeMNIWYVHKYLYTHNHNF 116
6**************9988777....4589***********9997775688999****************999899*************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 164 aa
Download sequence Send
to blast |
MPAHTQTLEE LEEYEYIVER TFHSEDEGYE FFNAFARNKG FSGRGRLHTQ QTKMSRQYVC 60
SKEGAGQPKF LNRETMKRRP RPVTRFDCPF EVVMRHKPEM NIWYVHKYLY THNHNFRASE 120
KRNILAYQTA GLRKYQIMDV MEKQYGGPHN VGYVIKDLYN FHF*
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