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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.7G331700.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
LBD |
Protein Properties |
Length: 208aa MW: 22265.4 Da PI: 7.7214 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.7G331700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 143.1 | 8.8e-45 | 17 | 116 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+Ca+Ck+lrr+C+++Cv+apyfp e+p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lqqq++ql+
Seita.7G331700.1.p 17 PCASCKLLRRRCTQECVFAPYFPPEDPHKFAIVHKVFGASNVSKMLQELPAQQRADAVSSLVYEANARMRDPVYGCVGAISYLQQQVSQLQ 107
7****************************************************************************************** PP
DUF260 92 aelallkee 100
+lal+k+e
Seita.7G331700.1.p 108 MQLALAKAE 116
*****9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MAGSGSSSGS GSSSSPPCAS CKLLRRRCTQ ECVFAPYFPP EDPHKFAIVH KVFGASNVSK 60 MLQELPAQQR ADAVSSLVYE ANARMRDPVY GCVGAISYLQ QQVSQLQMQL ALAKAEILCV 120 QMQHDGHATV SSPPSAASQQ LERKQQQLME CEAYGSLLMQ NGLMNTSFNS TAAAHQQQQM 180 LAGSLGSAGN TAMMLQEACL KKESLWT*
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