PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.7G277000.1.p
Common NameLOC101786000, SETIT_010440mg
Organism
Setaria italica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 360aa    MW: 39895.1 Da    PI: 9.6517
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.7G277000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.13.3e-072262511742
                         HHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeN 42 
                         A+rsR RK+++i+eLe++v++L++e 
  Seita.7G277000.1.p 226 AQRSRVRKLQYIAELERRVQSLQTEG 251
                         89********************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-5215274IPR004827Basic-leucine zipper domain
CDDcd147034.44E-14216266No hitNo description
SuperFamilySSF579591.06E-5225268No hitNo description
Gene3DG3DSA:1.20.5.1708.8E-8226281No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MMANGRLQKQ ALLPPRSPFP AAAAAPAPHA ELGPIARPRD AHHRHGHQRT SSESFLADEQ  60
PSWLDDLLDE PETPARGHGR PGHRRSSSDS FALFEGGGGA AAGMYDNVLD GMRGGGGGGQ  120
VASWAGAPEF FPEPSSFGRP QGRPWESRQM YRQGGGMPIP GREKNVGRHG PSSSFGDHEH  180
GHVPNGVDRK GHGDAAHDQR IGVERKDGLR HSQSEADTKR AKQQYAQRSR VRKLQYIAEL  240
ERRVQSLQTE GIDVTAEMDF LGQQNIMLDL ENKALKQRLE SLSQEHLIKR YQQEMFEREI  300
GRLRQLFQQQ QQQQQHVPQQ QAPTHSRSNS RDLDSQFANL SLKHGDPNST RDAVSGLRI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.7G277000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977157.10.0uncharacterized protein At4g06598
TrEMBLK3Y8990.0K3Y899_SETIT; Uncharacterized protein
STRINGSi010440m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.25e-51bZIP family protein