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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.7G199700.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
Nin-like |
| Protein Properties |
Length: 345aa MW: 39280 Da PI: 8.8437 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.7G199700.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 83.3 | 2.4e-26 | 203 | 252 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
++i+l ++++yF+lpi++A+k+L++++++LKr+CR+yGI+RWPhRkiksl
Seita.7G199700.1.p 203 DSITLVEIAQYFHLPIREASKTLKIGVSILKRKCRKYGIPRWPHRKIKSL 252
689*********************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MDMDAAVSTL TALSIFASTV EHAAFRSVHG YRVIGRKDGK WVRWERWVER QFVLSLSVPP 60
CREVAVPAAS PRILMAGWRG RPVFREGQTV GTWRCIVAFD SVAAVKPSSP PPPVLSPLVN 120
PQLECLPNLY KDLQKVFQFQ KVEKVPRRVL RDAKEQPIHS GEQEKTSDEA DSSGSDSDGD 180
TQSDKELAPS VQKQPRANRK HIDSITLVEI AQYFHLPIRE ASKTLKIGVS ILKRKCRKYG 240
IPRWPHRKIK SLDSLIQDLE YVLEDDPEED GQQELLQMEE EKQAAAIKAL TKRKKMLESE 300
KETLQQKPAL DLMTETKQFR DDVFKRRYRA KSAAIDMEME METE*
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