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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.7G186400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 344aa MW: 36187.5 Da PI: 4.5772 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.7G186400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.6 | 4.2e-20 | 148 | 199 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g+
Seita.7G186400.1.p 148 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 199
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MAFAGDADGF ALDFIREHLL GGGCGGVAAV DSPVDSDDVD VTIPVLPAEP EFEPTSFLPL 60 EQEQHHGYMG MDLTHEYMGC GAPAVGEAAA AFPEQEPAAP VIIKFGSQSS SPVRPPLTIA 120 VPPTSYAWAA TASAAAPAVA EAVEDYRKYR GVRQRPWGKY AAEIRDPKRR GSRVWLGTYD 180 TPVEAARAYD RAAFRMRGAK AILNFPNEVG TRGADLWAPP PAPAAKAATA ANKRKRQQPE 240 DTDDVEVVAV VNKAVKVEVP SSSSTQVSSS TTSPSSMSTR ETTASSTVTS PETTEAGAGA 300 EWLPVTPSSG SWEQYWEALL GGLPPLSPLS PIPTLGFPQL PVN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727525 | 1e-109 | KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds. |