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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Seita.7G181400.1.p |
| Common Name | LOC101770225, SETIT_010859mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
YABBY |
| Protein Properties |
Length: 265aa MW: 28067.2 Da PI: 7.9285 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.7G181400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 192.1 | 2.6e-59 | 25 | 222 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaa.eshldeslkee........................ 70
eq+Cyv+C+ C+tilav vP +slfk+vtvrCGhC++llsvnl+ +aa +++l ++++
Seita.7G181400.1.p 25 AEQEQLCYVHCKCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPTAAaNNQLPFGGQQQallsptsphglldemmpfqqapsl 115
6789*******************************************99976655055555555555888999999*87777777665543 PP
YABBY 71 .lleelkveeenlksnvekeesastsvssekl..................senedeevprvpp.virPPekrqrvPsaynrfikeeiqrik 141
+ ++ + st +s ++ + ++ ++p+ +r ekrqrvPsaynrfik+eiqrik
Seita.7G181400.1.p 116 tS-------------AEPASACVSTITSINNScggrnnasamsmappplkPAPQEPQLPKSAAsGNRTAEKRQRVPSAYNRFIKDEIQRIK 193
21.............22222222222222222223333333344677667677777888876658************************** PP
YABBY 142 asnPdishreafsaaaknWahfPkihfgl 170
asnPdi+hreafsaaaknWahfP+ihfgl
Seita.7G181400.1.p 194 ASNPDITHREAFSAAAKNWAHFPHIHFGL 222
***************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MMSSVPEAAF AMDQHLAPPQ LQTAAEQEQL CYVHCKCCDT ILAVGVPCSS LFKTVTVRCG 60
HCANLLSVNL RGLLLPTAAA NNQLPFGGQQ QALLSPTSPH GLLDEMMPFQ QAPSLTSAEP 120
ASACVSTITS INNSCGGRNN ASAMSMAPPP LKPAPQEPQL PKSAASGNRT AEKRQRVPSA 180
YNRFIKDEIQ RIKASNPDIT HREAFSAAAK NWAHFPHIHF GLMPDQGLKK ASMQNHEGGE 240
CMLFKDGLYA AAAAAASSMG IAPF*
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| Functional Description ? help
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| Source |
Description |
| UniProt | May be involved in leaf cell growth and differentiation, rather than abaxial cell fate determination. {ECO:0000250}. |
| UniProt | May be involved in leaf cell growth and differentiation, rather than abaxial cell fate determination. {ECO:0000269|PubMed:17351053}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by WOX3. {ECO:0000269|PubMed:17351053}. |
