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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.7G137600.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
NAC |
| Protein Properties |
Length: 387aa MW: 42735.9 Da PI: 4.636 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.7G137600.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 92.2 | 8.9e-29 | 57 | 202 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77
lp+G++F+P+d el+ ++L+ k + + ++++ i+e+ +i++++P++Lp +k + ++++fF++ +++y g+rk+r+
Seita.7G137600.1.p 57 LPAGVKFDPSDLELL-QHLQGKSNLPNstshalIDEFIPtIEEMeGICYTHPKNLP-DIKMDGSSLHFFHRVSNAYGCGHRKRRKisgddd 145
799************.889988776664555554443444999988**********.6777889********************8677777 PP
NAM 78 ...tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge...ktdWvmheyrl 128
++ +W++tg ++++++++g ++g kk+Lv+y+g+++ g+ + +Wvmh+y+l
Seita.7G137600.1.p 146 svfDERIRWHKTGASRAIYDEDGVKKGWKKILVLYRGSRRGGSkidRDNWVMHQYHL 202
77655788***************************99888777334689******98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MASSWVMTGV GLIKKIRNAT QLISLRLGEL VAEPYIKCPN CKCGIDTSDV SLVWPALPAG 60
VKFDPSDLEL LQHLQGKSNL PNSTSHALID EFIPTIEEME GICYTHPKNL PDIKMDGSSL 120
HFFHRVSNAY GCGHRKRRKI SGDDDSVFDE RIRWHKTGAS RAIYDEDGVK KGWKKILVLY 180
RGSRRGGSKI DRDNWVMHQY HLGADEDEPD GELVISKVFY QLPSKKNDKS EMGDVELESE 240
PSAAKIDPRT PMIHPPQSCL PNNSPCDTDQ YTPNQVDQQE ECSTSVCPVK VEAAECSAWS 300
AELSPAVVVA NLPAWDEPGQ PRDTTDPDPE PEAPIPVDGS NTDPFHGLPE LDTTFPCLGT 360
PSDCISLADI QLGSQDSFRG WLDSFY*
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