 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.7G121700.1.p |
Common Name | SETIT_009909mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
EIL |
Protein Properties |
Length: 527aa MW: 57628 Da PI: 5.4287 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.7G121700.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 347.9 | 2.1e-106 | 65 | 337 | 2 | 261 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn................ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgi 76
+lkkrmwkdq ll++l++r+ + + +a g+++++ +++ ++rrk+m raQDg++++Mlk+me+cna+GfvYg
Seita.7G121700.1.p 65 NLKKRMWKDQLLLMKLEGRSGRDRPHPDAGQGQQQQQpgadhwdqaltkekeeTPQARYRRKAMLRAQDGVIRHMLKMMEACNARGFVYGV 155
59****************99887655555444444446777777777777777************************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT- CS
EIN3 77 ipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekg 167
++e+g pv+g+sdsLr+WWk++v fd++gp a+ +++ + +s + + s h l+++qD+tlgSLLsal+qhc+ppqr+fpl++g
Seita.7G121700.1.p 156 VDETGVPVSGSSDSLRGWWKDDVGFDKAGPLALLSG-VHQAAGDPGSPM---AASFLHGLHDIQDSTLGSLLSALIQHCEPPQRSFPLDRG 242
********************************9977.556665544444...89************************************* PP
-HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S CS
EIN3 168 vepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekec 257
++pPWWPtG+e wwg++g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp+++++r+l++qsk+lq+kmsa++ ++++v+ qee++
Seita.7G121700.1.p 243 LAPPWWPTGQETWWGSQGeAQAHQGPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHKMSARDAETWSKVITQEEALD 333
******************9999******************************************************************987 PP
--XX CS
EIN3 258 atvs 261
++ +
Seita.7G121700.1.p 334 RHAQ 337
6433 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 527 aa
Download sequence Send
to blast |
MENCESIDYY QKPSSHAASK PTTMDKAFTE DKGKVDDHAA GQEPESQDEF FSDSESGSES 60 IEIANLKKRM WKDQLLLMKL EGRSGRDRPH PDAGQGQQQQ QPGADHWDQA LTKEKEETPQ 120 ARYRRKAMLR AQDGVIRHML KMMEACNARG FVYGVVDETG VPVSGSSDSL RGWWKDDVGF 180 DKAGPLALLS GVHQAAGDPG SPMAASFLHG LHDIQDSTLG SLLSALIQHC EPPQRSFPLD 240 RGLAPPWWPT GQETWWGSQG EAQAHQGPPP YRKPHDLKKA WKISLLSAVI KHLSPRFDQM 300 RKLVWQSKRL QHKMSARDAE TWSKVITQEE ALDRHAQRAL QITPLEEDED DDGGPDAGDV 360 DSPLAAAHHV DKRKRKVGRE GDSNAGGGGG GVDVGKALLA LPDIDCVPDA DRSSIDELMR 420 LYYRCLQGTE DDGEHDVKGA VAVVRDGGQH SGGGAVDEAA PVAHRDMFLH GSQQHGGGAV 480 VPHQAAANDA SSVHEHDMLR SMLGVADVVD MSDFLNSPIW QWGVYD*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT043083 | 0.0 | BT043083.1 Zea mays full-length cDNA clone ZM_BFc0091K23 mRNA, complete cds. |
GenBank | JX469969 | 0.0 | JX469969.1 Zea mays subsp. mays clone UT3232 EIL-type transcription factor mRNA, partial cds. |