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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.7G081300.1.p |
Common Name | LOC101761953, SETIT_012587mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 278aa MW: 28615.9 Da PI: 4.2556 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.7G081300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 41 | 92 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++y GVr+++ +gr++AeIrdp + + r++lg+f+taeeAa a+++a+++l+g+
Seita.7G081300.1.p 41 TRYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRGA 92
5799******.**********843...4*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009739 | Biological Process | response to gibberellin |
GO:0010030 | Biological Process | positive regulation of seed germination |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MNFSSYFFSS SSSSADKKSS SSSSKRRQQA AAQPQPDANT TRYLGVRRRP WGRYAAEIRD 60 PATKERHWLG TFDTAEEAAV AYDRAARSLR GARARTNFAY PDLPPGSSIT PYLSPDLTSG 120 DNAGQLLQPF YADPAAASLP AGPAAKGGGD AGGFGAAGDY YASYGGYSAD DMSALMDDLA 180 IPDDIPTDDY GVDAGGAMDL SSVYGGGGGA NASDGAGGVG WCDASELSAY GASAAASHGV 240 YFEEGYVHSP LFSPMPAVDD ACADGFQLGG SSSSYYY*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU974106 | 0.0 | EU974106.1 Zea mays clone 439808 AP2 domain containing protein mRNA, complete cds. |