 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.7G057700.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
ARR-B |
Protein Properties |
Length: 356aa MW: 40002.7 Da PI: 5.6309 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.7G057700.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 47.9 | 3.1e-15 | 166 | 212 | 4 | 51 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
++W+ LH++F++a+e L G+ A P++i lm+v+g+ ++h+ SHLQ
Seita.7G057700.1.p 166 ICWNDYLHRKFLHALEIL-GEGAASPRNIEILMNVEGVNRKHISSHLQ 212
79****************.9**************************** PP
|
2 | Response_reg | 47.5 | 1e-16 | 15 | 125 | 1 | 110 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
v++vd+++ ++ r++l +y ++++ +++ +al+ l+ + +D+ l+ + m +m+G+++l re ++++++i+++ + +++ ++++
Seita.7G057700.1.p 15 VIVVDEDKHHANSTRSMLCTLNY-HATAYTSPIKALDFLEGHAqeVDMALVAVHMEEMHGFQFLDVVREDHKDIQVIMMSNETTMDIMKRC 104
799********************.***************777667********************************************** PP
HHTTESEEEESS--HHHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvka 110
+k+Ga + Kp+d ++++
Seita.7G057700.1.p 105 IKLGACFLVNKPIDAHTIHNM 125
**************9999875 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MGKRKKLSPT HGFSVIVVDE DKHHANSTRS MLCTLNYHAT AYTSPIKALD FLEGHAQEVD 60 MALVAVHMEE MHGFQFLDVV REDHKDIQVI MMSNETTMDI MKRCIKLGAC FLVNKPIDAH 120 TIHNMWRHID FGNSRMHNIK KSLQGNGEEQ DVSYWKESAK TKKGYICWND YLHRKFLHAL 180 EILGEGAASP RNIEILMNVE GVNRKHISSH LQCRTSASKS ESAKSHQESP NNSPDIQQEE 240 MTADEDMPHA QMGSFSDNNA HAAMRRSIQF STMYDESQYL YFSSSDGGLD MMEDRNDDTC 300 AFGFSALVSA AETFSADGTK EMLNNNSSVE QDCQGDKVGK AVKLVEYSDS EADEI*
|