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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.7G008200.1.p |
| Common Name | SETIT_012600mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
GeBP |
| Protein Properties |
Length: 258aa MW: 27601.6 Da PI: 6.314 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.7G008200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 44.5 | 4.2e-14 | 44 | 139 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91
f r+wse De+ +L Gl ++a++g+ p ++a ++ +++++ +++ eK+rrL+ K+ + ++ e + ++ +el
Seita.7G008200.1.p 44 FVRVWSEADEVRILEGLAAYAADHGAPPARsQLHAAL-EGRSLDKAEFTVTEIYEKVRRLRTKYCNLRDAgGPPVPEGGEDGGDEVRKYEL 133
89***********************988773444444.4566778999******************9999544455555667778889*** PP
DUF573 92 skkiWg 97
sk iWg
Seita.7G008200.1.p 134 SKAIWG 139
*****8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MNRPPHSSRT ADLVSPAADA AVEEAPMAAS KPAAGVRKKP SVAFVRVWSE ADEVRILEGL 60
AAYAADHGAP PARSQLHAAL EGRSLDKAEF TVTEIYEKVR RLRTKYCNLR DAGGPPVPEG 120
GEDGGDEVRK YELSKAIWGD QPANVAKKGG STSAAAVAVL PKAGGAIPRV RRGLEELQGL 180
FPCLAAEVEK VTNDEMLAPV LKRAFEFIDD QKAGELDDKV KKQMVKEAQV TMSGATLRDE 240
VLKMLIRSME IDMASVV*
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