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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.6G232500.3.p |
Common Name | SETIT_014861mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 398aa MW: 43540.2 Da PI: 7.4803 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.6G232500.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 77 | 105 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33
k rr+++NReAAr+sR+RKka+i++Le
Seita.6G232500.3.p 77 KTVRRLAQNREAARKSRLRKKAYIQQLES 105
5679***********************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MTMRSVHTPK EGSNLTVDNT DDSKSSSKNT NNHSSDHQLG AAAANMASQF DQVPQQIQHK 60 DMATGSTPKT GKALDPKTVR RLAQNREAAR KSRLRKKAYI QQLESSKLKL AQMEQDVQRA 120 RSQGLFLGGG PGANTSSGAA MFDVGYARWL DDHGRRMAEL QGALHAHLPD GDLRAIVDDT 180 LTHHDELFQL KVVAAKSDVS HLITGAWTTP AERCFLWMGG FRPSDLLKTL LPQLDPLTEQ 240 QVVGICNLQR SSQEAEEALS QGLEQLHQSL ADTMAGGSLI DDINMSFMGQ MALALGKLAN 300 LEGFVIQADN LRQQALHQMH RILTVRQAAR CFLAIGEYHN RLRALSSLWA SRPREMLVAD 360 EGNCGEISVA TQPSQSQFSS LLTHAVELTF SLGAREK*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Chern M, et al.
Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] - Miyamoto K, et al.
Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]
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