PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.6G232500.3.p
Common NameSETIT_014861mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 398aa    MW: 43540.2 Da    PI: 7.4803
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.6G232500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-1177105533
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                         k  rr+++NReAAr+sR+RKka+i++Le 
  Seita.6G232500.3.p  77 KTVRRLAQNREAARKSRLRKKAYIQQLES 105
                         5679***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-573148IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.86475119IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-875117No hitNo description
PfamPF001701.0E-877106IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.42E-777110No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141443.3E-28157230IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MTMRSVHTPK EGSNLTVDNT DDSKSSSKNT NNHSSDHQLG AAAANMASQF DQVPQQIQHK  60
DMATGSTPKT GKALDPKTVR RLAQNREAAR KSRLRKKAYI QQLESSKLKL AQMEQDVQRA  120
RSQGLFLGGG PGANTSSGAA MFDVGYARWL DDHGRRMAEL QGALHAHLPD GDLRAIVDDT  180
LTHHDELFQL KVVAAKSDVS HLITGAWTTP AERCFLWMGG FRPSDLLKTL LPQLDPLTEQ  240
QVVGICNLQR SSQEAEEALS QGLEQLHQSL ADTMAGGSLI DDINMSFMGQ MALALGKLAN  300
LEGFVIQADN LRQQALHQMH RILTVRQAAR CFLAIGEYHN RLRALSSLWA SRPREMLVAD  360
EGNCGEISVA TQPSQSQFSS LLTHAVELTF SLGAREK*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.6G232500.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022683425.10.0transcription factor TGAL4-like isoform X1
SwissprotQ53Q700.0TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A368RRD50.0A0A368RRD5_SETIT; Uncharacterized protein
STRINGSi014861m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-140bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]