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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.6G192200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
Dof |
Protein Properties |
Length: 253aa MW: 26375.5 Da PI: 7.7677 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.6G192200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 122.1 | 1.9e-38 | 35 | 92 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+ +cprC+s++tkfCyynny++sqPr+fCk+CrryWtkGG+lrnvPvGgg+rk+ +s
Seita.6G192200.1.p 35 EGDPCPRCESRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKKPSS 92
6789**************************************************9876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MQGAAAEPGR RLAQQQFAGV DLRRPKGYAV PAPAEGDPCP RCESRDTKFC YYNNYNTSQP 60 RHFCKGCRRY WTKGGTLRNV PVGGGTRKKP SSSPPSSYAA AANANKPKKP SKKKRRVVVV 120 APQDPVAAPV AAPTLVAAPA ADSAKTTTNE TTTTTTNETT ATTATPTTTD AASEITTELV 180 VPAAEEEDSL AHLLQPDVAL GLGTSDFPAA GKALDLEPDS FEWPAAFDLG GACWGSAGFA 240 DPDPAGLFLN LP*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 111 | 115 | KKKRR |
2 | 111 | 116 | KKKRRV |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence at the MNF1-binding site. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU965859 | 4e-88 | EU965859.1 Zea mays clone 289437 dof zinc finger protein MNB1A mRNA, complete cds. |
GenBank | EU969388 | 4e-88 | EU969388.1 Zea mays clone 329608 dof zinc finger protein MNB1A mRNA, complete cds. |