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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.6G180900.1.p |
Common Name | LOC101765591, SETIT_013904mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 361aa MW: 37640.5 Da PI: 6.9223 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.6G180900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 45.5 | 1.7e-14 | 282 | 333 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
+r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N +L+k+ +e+ ++
Seita.6G180900.1.p 282 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKELNAELQKKQDEMMEMQ 333
79******************************************99999885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MDLKDGERRG AAGPGPLSRQ GSIYSLTFDE FQSTLGGMGG GLGKDFGSMN MDELLRSIWT 60 AEESQAMASA SAAASASAAG AAGEDGAALQ RQGSLTLPRT LSVKTVDEVW RDFVREGPAP 120 GAAGGGAEPQ PNRQPTLGEM TLEEFLVRAG VVRDNPTAAA MAAAAAVPAQ PVAPRPIQAV 180 SNGASIFFGN FGAANDAGTG AMGFAPVGIG DQAMGNGLMP GVAGMASAAV TVSPVDTSVA 240 QLDSVGNGNG DLSSPMAPVP YPFEGVIRGR RSGAGVEKVV ERRQRRMIKN RESAARSRAR 300 KQAYTMELEA EVQKLKELNA ELQKKQDEMM EMQKNQVLEV VSNPYAQKKR CLRRTLTGPW 360 *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G49720.1 | 4e-71 | abscisic acid responsive element-binding factor 1 |
Publications
? help Back to Top |
- Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell, 2002. 14(12): p. 3177-89 [PMID:12468735] - Kobayashi Y, et al.
Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors. Plant J., 2005. 44(6): p. 939-49 [PMID:16359387] - Kobayashi F,Maeta E,Terashima A,Takumi S
Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiol Plant, 2008. 134(1): p. 74-86 [PMID:18433415]
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