 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Seita.6G178300.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
GeBP |
| Protein Properties |
Length: 271aa MW: 30873.8 Da PI: 9.5962 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.6G178300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 97.4 | 1.4e-30 | 26 | 123 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkife 90
+++r+ws eDe+++L +li+++ak+g +++d++++y ++ +++ ++vs++ql++K+rrLK+K+k vk+ak++++p++ +ehd++++e
Seita.6G178300.1.p 26 RPSRVWSPEDEVTILNALIEYRAKKGRlpASFQDTSDLYLQIFGQLTANVSTTQLSDKVRRLKHKYKLLVKRAKNERDPDLPTEHDHNVYE 116
679************************888899********************************************************** PP
DUF573 91 lskkiWg 97
l++k+W+
Seita.6G178300.1.p 117 LCEKVWR 123
******7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MDVSSRDAAA ASSELRTKHR PGYQKRPSRV WSPEDEVTIL NALIEYRAKK GRLPASFQDT 60
SDLYLQIFGQ LTANVSTTQL SDKVRRLKHK YKLLVKRAKN ERDPDLPTEH DHNVYELCEK 120
VWRLKSLEGG DAESNEEQEI KESDEEMENE REHRERTSKK PKTSRFENAN GNATVTAVRA 180
SHGNGSGRDD AEKGKQMYPY LWAAIEELSK EHPSGPIFRK AFGVLEKAKA RAIEEKLRKF 240
RMSVVRLQLN RMDLTKLSVG MVLDALEGPH *
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G00390.1 | 4e-13 | DNA-binding storekeeper protein-related transcriptional regulator |
