|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.6G164700.2.p |
Common Name | SETIT_013842mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
ERF |
Protein Properties |
Length: 295aa MW: 31802 Da PI: 4.8179 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.6G164700.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 48.1 | 3e-15 | 25 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + +k+ +lg++ t eeAa a++ a+ + +g
Seita.6G164700.2.p 25 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTYATQEEAAVAYDIAAIEHRG 76
89****99**********988422...5**********************99987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MEGQPREEYI GSLRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK YLYLGTYATQ 60 EEAAVAYDIA AIEHRGLNAV TNFDIGHYVN HWHRHRRGAG GGDSLGAMDA ATPVVVPFQL 120 PDDLPERPAA TGLNGTMGAA DLHDGEDQMP HHACSFLGDG AQLADQVGPP AHHAAPTPSA 180 LDLLLQSPKF KEMMEQVSEA AAMADGNSSS SAAETSWASS SSSSPPQPLS PQRQPEISGG 240 STPARCSFPD DVQTFFDFEN ETDMGFTYAE VDTFLFGDLG EYAAPMFQYC ELDV*
|