 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Seita.6G053400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
G2-like |
| Protein Properties |
Length: 355aa MW: 37123.6 Da PI: 7.3633 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.6G053400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.6 | 2.4e-32 | 162 | 215 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+++AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Seita.6G053400.1.p 162 PRMRWTSTLHARFVHAVELLGGHDRATPKSVLELMDVKDLTLAHVKSHLQMYRT 215
9****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MELFPSQPDL SLQIGLPTSA TPHDHHHHAA AAALNARFFA AAGGGGNGVG NPAAMAPSLQ 60
LPMPVPLPLP VQLPMPPSAA AGAAGLYYHP DASMLRPIRG VPLYQHPHTH AVPPTFPPHA 120
AAAGPCFCEP CHVAAGAWRR AGCGAGARVA GFPPAKRAAR APRMRWTSTL HARFVHAVEL 180
LGGHDRATPK SVLELMDVKD LTLAHVKSHL QMYRTVKNTE RPAASSDQAD GFENGSAGEI 240
CDDNSLDLHG YGGGGSGRPE SAAAAARHGR LAACNDHGSS TGAHGALWNS SSREDWTGFP 300
SESNTGSMHS LKEQMQSKSL EILSDMNSCV SETTSSTSEL NLEFTLGRPQ NRPN*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 3e-16 | 163 | 217 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-16 | 163 | 217 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-16 | 163 | 217 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-16 | 163 | 217 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU957008 | 0.0 | EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds. |
