PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.6G044300.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 413aa    MW: 44948 Da    PI: 7.2979
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.6G044300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.9e-11127166339
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39 
                         ++k +rr+++NReAAr+sR+RKka+i++Le+   k ++Le
  Seita.6G044300.2.p 127 RDKTQRRLAQNREAARKSRLRKKAYIQNLETsrlKLAQLE 166
                         79****************************8333444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.3E-8124169No hitNo description
SMARTSM003380.0041125178IPR004827Basic-leucine zipper domain
PfamPF001705.8E-8127167IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.036127169IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.34E-7129168No hitNo description
PROSITE patternPS000360132147IPR004827Basic-leucine zipper domain
PfamPF141446.1E-27212286IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MELYHGYLED HFNIHKLSRL QPLATTSGAP AGWYGAPAAA ASGGAMGIYE RQRHMVAAGL  60
WGEPFRPDGD AFVAPLAAAA PVTGVAVDVV VETEAKFALQ AQDEAVPPVE EVAPSSDSFG  120
HDDARPRDKT QRRLAQNREA ARKSRLRKKA YIQNLETSRL KLAQLEQELT MARRQQGHGA  180
AGAGFLAPPV DPRVTAFELE YARWAEEQKR QAAELRAVLQ SGAPELQLRL LVDAAVAHYD  240
ALFDARSRAA RADAVFVLSG VWRAPAERFF LWIGGFRPSE LLQVLAPRLD PLAERQASAV  300
RALQNTARQL EDALSQGMSK LQQTLVDALL TVDAPDDGGG YAARQMASAV GKLDDLVSFV  360
DQADHLRQQT LRNMNKILTL PQAARGLLAL ADYCQQLRAL SSLWAARPRE PA*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.6G044300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012702136.10.0transcription factor HBP-1b(c38) isoform X1
SwissprotA0A0P0WFC81e-118TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBLA0A368RI550.0A0A368RI55_SETIT; Uncharacterized protein
STRINGSi013962m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.14e-97bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Okada A, et al.
    OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
    J. Biol. Chem., 2009. 284(39): p. 26510-8
    [PMID:19635799]
  3. Okada K
    The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
    Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25
    [PMID:21737944]
  4. Yamane H
    Biosynthesis of phytoalexins and regulatory mechanisms of it in rice.
    Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8
    [PMID:23748776]
  5. Miyamoto K, et al.
    Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
    PLoS ONE, 2014. 9(8): p. e105823
    [PMID:25157897]
  6. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]