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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Seita.5G419200.1.p |
| Common Name | LOC101754901, SETIT_000815mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
ARR-B |
| Protein Properties |
Length: 579aa MW: 64841.8 Da PI: 4.9428 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.5G419200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 81.7 | 8.4e-26 | 195 | 248 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+gLt+e+v+SHLQkYRl
Seita.5G419200.1.p 195 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 248
68*******************.9*******************************8 PP
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| 2 | Response_reg | 80.1 | 7.5e-27 | 15 | 123 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
vl+vdD+p+ +++l+++l+k y ev+++ ++ al++l+e++ +D+++ D++mp+mdG++ll++i e +lp+i+++ ge + + +
Seita.5G419200.1.p 15 VLVVDDDPTWLKILEKMLRKCSY-EVTTCGLASVALQILRERRnkFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKG 103
89*********************.***************888888**********************6654.8****************** PP
HHTTESEEEESS--HHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvk 109
++ Ga d+l Kp+ ++el++
Seita.5G419200.1.p 104 VQHGACDYLLKPVRMKELRN 123
*****************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000160 | Biological Process | phosphorelay signal transduction system |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0010082 | Biological Process | regulation of root meristem growth |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 579 aa
Download sequence Send
to blast |
MALADATAFP YGLRVLVVDD DPTWLKILEK MLRKCSYEVT TCGLASVALQ ILRERRNKFD 60
IVISDVNMPD MDGFKLLEHI GLEMDLPVIM MSIDGETSRV MKGVQHGACD YLLKPVRMKE 120
LRNIWQHVYR KKMHEVKEIE GNDSCDDLQI FRNGCEGLEE RGLFMRADSD TMRKRKDVDK 180
DHADQDSSDG ATVKKARVVW SVDLHQKFVN AVNQIGFDKV GPKKILDLMN VPGLTRENVA 240
SHLQKYRLYL SRLQKQNEER ILGATRQDFS HKGPPDNLNL RNSFQEQPSN GANGFQHTSQ 300
KIQAQSNMLD PHLEDTKIVV PLKVSDKNGT PVSDVIDPQN VPSASPLGGV LSFERMPLNQ 360
DRKPSETMIL ECQSWSGNVP PKQFMQYPKH NHERCDLLGD YSCLPKPDLE HPITPGNLYV 420
PPPLVSMSCS MEGDVRDFSD VKRDLLGCMK SLSPALTCTV DSVSAQLSDS VVTSTNNDPK 480
FSSVEGLSSS KECLFDPARN QTTLLNSEEA SIICGTDLAC LPDDLSGYQL QGIGLNNIDL 540
FQCNDAMMLH GLQNNWYDDP ELSSEIMEFP LLDECLFA*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU974774 | 0.0 | EU974774.1 Zea mays clone 457889 two-component response regulator ARR11 mRNA, complete cds. |
